ER Morrissey, MA Juárez, KJ Denby and NJ Burroughs (2011). Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression (ZIP, 17KB)
ER Morrissey, MA Juárez, KJ Denby and NJ Burroughs (2010). On reverse engineering of gene interaction networks using time course data with repeated measurements (MAT, 25KB)
ER Morrissey, MA Juárez, KJ Denby and NJ Burroughs (2011). Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression (ZIP, 32KB)
ER Morrissey, MA Juárez, KJ Denby and NJ Burroughs (2010). On reverse engineering of gene interaction networks using time course data with repeated measurements (ZIP, 14KB)
ER Morrissey has developed an R-Bioconductor package, GRENITS, which implements the models described in the papers above.
ER Morrissey, MA Juárez, KJ Denby and NJ Burroughs (2011). Inferring the time-invariant topology of a nonlinear sparse gene regulatory network using fully Bayesian spline autoregression (PDF, 179KB)
ER Morrissey, MA Juárez, KJ Denby and NJ Burroughs (2010). On reverse engineering of gene interaction networks using time course data with repeated measurements (PDF, 154KB)